"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/deprecation.py:144: FutureWarning: The sklearn.cluster.birch module is deprecated in version 0.22 and will be removed in version 0.24. The corresponding classes / functions should instead be imported from sklearn.cluster. Anything that cannot be imported from sklearn.cluster is now part of the private API.\n",
" warnings.warn(message, FutureWarning)\n",
"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/deprecation.py:144: FutureWarning: The sklearn.neighbors.kde module is deprecated in version 0.22 and will be removed in version 0.24. The corresponding classes / functions should instead be imported from sklearn.neighbors. Anything that cannot be imported from sklearn.neighbors is now part of the private API.\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 297, in _bootstrap\n",
" self.run()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 297, in _bootstrap\n",
" self.run()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 99, in run\n",
" self._target(*self._args, **self._kwargs)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 121, in worker\n",
" result = (True, func(*args, **kwds))\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 44, in mapstar\n",
" return list(map(*args))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 89, in map_onto\n",
" return parallel_runner.run(level, block)\n",
"Process ForkPoolWorker-2:\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 59, in run\n",
" con_info, labeled_lb = next(it)\n",
"Traceback (most recent call last):\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py\", line 90, in construct\n",
" model.train(learnblock)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 297, in _bootstrap\n",
" self.run()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 99, in run\n",
" self._target(*self._args, **self._kwargs)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 99, in run\n",
" self._target(*self._args, **self._kwargs)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 121, in worker\n",
" result = (True, func(*args, **kwds))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py\", line 245, in train\n",
" self.model.fit(data)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 44, in mapstar\n",
" return list(map(*args))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py\", line 859, in fit\n",
" order=order, copy=self.copy_x)\n",
"Traceback (most recent call last):\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 121, in worker\n",
" result = (True, func(*args, **kwds))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 89, in map_onto\n",
" return parallel_runner.run(level, block)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 297, in _bootstrap\n",
" self.run()\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 59, in run\n",
" con_info, labeled_lb = next(it)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 99, in run\n",
" self._target(*self._args, **self._kwargs)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py\", line 90, in construct\n",
" model.train(learnblock)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 44, in mapstar\n",
" return list(map(*args))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py\", line 245, in train\n",
" self.model.fit(data)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 121, in worker\n",
" result = (True, func(*args, **kwds))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py\", line 859, in fit\n",
" order=order, copy=self.copy_x)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 89, in map_onto\n",
" return parallel_runner.run(level, block)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 44, in mapstar\n",
" return list(map(*args))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py\", line 601, in check_array\n",
" if copy and np.may_share_memory(array, array_orig):\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 89, in map_onto\n",
" return parallel_runner.run(level, block)\n",
" File \"<__array_function__ internals>\", line 6, in may_share_memory\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 59, in run\n",
" con_info, labeled_lb = next(it)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/source_adapter.py\", line 103, in __getitem__\n",
" return self.df.iloc[item][:end]\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py\", line 90, in construct\n",
" model.train(learnblock)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py\", line 245, in train\n",
" self.model.fit(data)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/series.py\", line 871, in __getitem__\n",
" result = self.index.get_value(self, key)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexes/base.py\", line 4404, in get_value\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 59, in run\n",
" con_info, labeled_lb = next(it)\n",
" File \"pandas/_libs/index.pyx\", line 80, in pandas._libs.index.IndexEngine.get_value\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py\", line 90, in construct\n",
" model.train(learnblock)\n",
" File \"pandas/_libs/index.pyx\", line 90, in pandas._libs.index.IndexEngine.get_value\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py\", line 601, in check_array\n",
" if copy and np.may_share_memory(array, array_orig):\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py\", line 859, in fit\n",
" order=order, copy=self.copy_x)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py\", line 245, in train\n",
" self.model.fit(data)\n",
" File \"pandas/_libs/index.pyx\", line 116, in pandas._libs.index.IndexEngine.get_loc\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py\", line 859, in fit\n",
" order=order, copy=self.copy_x)\n",
"KeyboardInterrupt\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py\", line 601, in check_array\n",
" if copy and np.may_share_memory(array, array_orig):\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py\", line 601, in check_array\n",
" if copy and np.may_share_memory(array, array_orig):\n",
" File \"<__array_function__ internals>\", line 6, in may_share_memory\n",
" File \"<__array_function__ internals>\", line 6, in may_share_memory\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/source_adapter.py\", line 103, in __getitem__\n",
" return self.df.iloc[item][:end]\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/source_adapter.py\", line 103, in __getitem__\n",
" return self.df.iloc[item][:end]\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexing.py\", line 1768, in __getitem__\n",
" File \"<__array_function__ internals>\", line 6, in may_share_memory\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexing.py\", line 2140, in _getitem_axis\n",
" return self._get_loc(key, axis=axis)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexing.py\", line 628, in _get_loc\n",
" return self.obj._ixs(key, axis=axis)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/source_adapter.py\", line 103, in __getitem__\n",
" return self.df.iloc[item][:end]\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/series.py\", line 910, in __getitem__\n",
" return self._get_with(key)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/frame.py\", line 2735, in _ixs\n",
" new_values = self._data.fast_xs(i)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexing.py\", line 1768, in __getitem__\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/internals/managers.py\", line 920, in fast_xs\n",
" result[rl] = blk.iget((i, loc))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/series.py\", line 915, in _get_with\n",
" return self._slice(key)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/series.py\", line 865, in _slice\n",
" slobj = self.index._convert_slice_indexer(slobj, kind=kind or \"getitem\")\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexes/base.py\", line 2935, in _convert_slice_indexer\n",
" if self.is_integer() or is_index_slice:\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexes/base.py\", line 1671, in is_integer\n",
" return self.inferred_type in [\"integer\"]\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexing.py\", line 2140, in _getitem_axis\n",
" return self._get_loc(key, axis=axis)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexing.py\", line 628, in _get_loc\n",
" return self.obj._ixs(key, axis=axis)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/frame.py\", line 2735, in _ixs\n",
" new_values = self._data.fast_xs(i)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/internals/managers.py\", line 920, in fast_xs\n",
" result[rl] = blk.iget((i, loc))\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/internals/blocks.py\", line 365, in iget\n",
" def iget(self, i):\n",
"KeyboardInterrupt\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/internals/blocks.py\", line 366, in iget\n",
" return self.values[i]\n",
"KeyboardInterrupt\n",
"KeyboardInterrupt\n",
"Process ForkPoolWorker-7:\n",
"Traceback (most recent call last):\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 297, in _bootstrap\n",
" self.run()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/queues.py\", line 352, in get\n",
" res = self._reader.recv_bytes()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 99, in run\n",
" self._target(*self._args, **self._kwargs)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 110, in worker\n",
" task = get()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/connection.py\", line 216, in recv_bytes\n",
" buf = self._recv_bytes(maxlength)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/connection.py\", line 411, in _recv_bytes\n",
" return self._recv(size)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/connection.py\", line 386, in _recv\n",
" buf.write(chunk)\n",
"KeyboardInterrupt\n",
"Process ForkPoolWorker-8:\n",
"Traceback (most recent call last):\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 297, in _bootstrap\n",
" self.run()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py\", line 99, in run\n",
" self._target(*self._args, **self._kwargs)\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py\", line 110, in worker\n",
" task = get()\n",
" File \"/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/queues.py\", line 354, in get\n",
" return _ForkingPickler.loads(res)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/base.py\", line 309, in __setstate__\n",
" def __setstate__(self, state):\n",
"KeyboardInterrupt\n"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"Traceback (most recent call last):\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 182, in search\n",
" return self.search_parallel(block)\n",
" File \"/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py\", line 220, in search_parallel\n",
"\u001b[0;32m~/Project/python/test_venv/lib/python3.7/site-packages/IPython/core/interactiveshell.py\u001b[0m in \u001b[0;36mshowtraceback\u001b[0;34m(self, exc_tuple, filename, tb_offset, exception_only, running_compiled_code)\u001b[0m\n\u001b[1;32m 2043\u001b[0m \u001b[0;31m# in the engines. This should return a list of strings.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2044\u001b[0;31m \u001b[0mstb\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_render_traceback_\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2045\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mException\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;31mAttributeError\u001b[0m: 'KeyboardInterrupt' object has no attribute '_render_traceback_'",
"\nDuring handling of the above exception, another exception occurred:\n",
/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/deprecation.py:144: FutureWarning: The sklearn.cluster.birch module is deprecated in version 0.22 and will be removed in version 0.24. The corresponding classes / functions should instead be imported from sklearn.cluster. Anything that cannot be imported from sklearn.cluster is now part of the private API.
warnings.warn(message, FutureWarning)
/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/deprecation.py:144: FutureWarning: The sklearn.neighbors.kde module is deprecated in version 0.22 and will be removed in version 0.24. The corresponding classes / functions should instead be imported from sklearn.neighbors. Anything that cannot be imported from sklearn.neighbors is now part of the private API.
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap
self.run()
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap
self.run()
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 99, in run
self._target(*self._args, **self._kwargs)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 121, in worker
result = (True, func(*args, **kwds))
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 44, in mapstar
return list(map(*args))
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 89, in map_onto
return parallel_runner.run(level, block)
Process ForkPoolWorker-2:
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 59, in run
con_info, labeled_lb = next(it)
Traceback (most recent call last):
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py", line 90, in construct
model.train(learnblock)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap
self.run()
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 99, in run
self._target(*self._args, **self._kwargs)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 99, in run
self._target(*self._args, **self._kwargs)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 121, in worker
result = (True, func(*args, **kwds))
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py", line 245, in train
self.model.fit(data)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 44, in mapstar
return list(map(*args))
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py", line 859, in fit
order=order, copy=self.copy_x)
Traceback (most recent call last):
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 121, in worker
result = (True, func(*args, **kwds))
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 89, in map_onto
return parallel_runner.run(level, block)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap
self.run()
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 59, in run
con_info, labeled_lb = next(it)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/process.py", line 99, in run
self._target(*self._args, **self._kwargs)
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py", line 90, in construct
model.train(learnblock)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 44, in mapstar
return list(map(*args))
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py", line 245, in train
self.model.fit(data)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 121, in worker
result = (True, func(*args, **kwds))
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py", line 859, in fit
order=order, copy=self.copy_x)
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 89, in map_onto
return parallel_runner.run(level, block)
File "/home/dmt/Applications/anaconda3/lib/python3.7/multiprocessing/pool.py", line 44, in mapstar
return list(map(*args))
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py", line 601, in check_array
if copy and np.may_share_memory(array, array_orig):
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 89, in map_onto
return parallel_runner.run(level, block)
File "<__array_function__ internals>", line 6, in may_share_memory
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 59, in run
con_info, labeled_lb = next(it)
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/source_adapter.py", line 103, in __getitem__
return self.df.iloc[item][:end]
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py", line 90, in construct
model.train(learnblock)
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py", line 245, in train
self.model.fit(data)
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/series.py", line 871, in __getitem__
result = self.index.get_value(self, key)
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexes/base.py", line 4404, in get_value
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/usecases/query.py", line 59, in run
con_info, labeled_lb = next(it)
File "pandas/_libs/index.pyx", line 80, in pandas._libs.index.IndexEngine.get_value
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/domain/construction/construction.py", line 90, in construct
model.train(learnblock)
File "pandas/_libs/index.pyx", line 90, in pandas._libs.index.IndexEngine.get_value
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py", line 601, in check_array
if copy and np.may_share_memory(array, array_orig):
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py", line 859, in fit
order=order, copy=self.copy_x)
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/ml_adapter.py", line 245, in train
self.model.fit(data)
File "pandas/_libs/index.pyx", line 116, in pandas._libs.index.IndexEngine.get_loc
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/cluster/_kmeans.py", line 859, in fit
order=order, copy=self.copy_x)
KeyboardInterrupt
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py", line 601, in check_array
if copy and np.may_share_memory(array, array_orig):
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/sklearn/utils/validation.py", line 601, in check_array
if copy and np.may_share_memory(array, array_orig):
File "<__array_function__ internals>", line 6, in may_share_memory
File "<__array_function__ internals>", line 6, in may_share_memory
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/source_adapter.py", line 103, in __getitem__
return self.df.iloc[item][:end]
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/cml-0.1.dev0-py3.7.egg/cml/ports/source_adapter.py", line 103, in __getitem__
return self.df.iloc[item][:end]
File "/home/dmt/Project/python/test_venv/lib/python3.7/site-packages/pandas/core/indexing.py", line 1768, in __getitem__